Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_02067

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
ABC transporter substrate-binding protein
Gene
—
Location
NZ_BBCE01000019.1:23,368–24,693 (+)   441 aa
Keys
gbid 1775766   gene_oid 2731400719   SignalP TM×1

Domain architecture

Pfam domain ▏signal peptide ▮ TM helix
Pfam signature: pfam01547

Putative operon (same contig + strand, gap ≤ 300 bp)

Spalm_02063 Spalm_02064 Spalm_02065 Spalm_02066 Spalm_02067 ◀ Spalm_02068 Spalm_02069 Spalm_02070 Spalm_02071 Spalm_02072 Spalm_02073 Spalm_02074 Spalm_02075 Spalm_02076   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

3 proteins across 2 genomes share architecture group #273  pfam01547

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00624 622 pfam01547
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02067 ◀ 441 SPTM pfam01547
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00393 438 SPTM pfam01547
↑ Top




v1.00 @copyright 2026 UCLA