Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_01662

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
L-seryl-tRNA(Sec) selenium transferase
Gene
selA
Location
NZ_BBCE01000013.1:44,382–45,677 (+)   431 aa
Keys
gbid 1776289   gene_oid 2731400243  

Domain architecture

Pfam domain
Pfam signature: pfam12390,pfam03841

Putative operon (same contig + strand, gap ≤ 300 bp)

Spalm_01661 Spalm_01662 ◀ Spalm_01663 Spalm_01664 Spalm_01665 Spalm_01666   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1365  pfam03841,pfam12390

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01662 ◀ 431 pfam12390,pfam03841
Syntrophomonas curvata DSM15682 / GL#14 Scur_02910 469 pfam12390,pfam03841
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02164 473 pfam12390,pfam03841
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01097 473 pfam12390,pfam03841
Syntrophomonas wolfei saponavida / SD2 Sws_01122 481 pfam12390,pfam03841
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02938 470 pfam12390,pfam03841
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02606 470 pfam12390,pfam03841
Syntrophomonas zehnderi OL-4 Szehn Szeh_00120 506 pfam12390,pfam03841
↑ Top




v1.00 @copyright 2026 UCLA