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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_02094

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
DNA recombination protein RmuC
Gene
rmuC
Location
NZ_BBCE01000019.1:45,182–46,615 (−)   477 aa
Keys
gbid 1776312   gene_oid 2731400746   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam02646

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #13  pfam02646

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02094 ◀ 477 TM pfam02646
Syntrophomonas curvata DSM15682 / GL#14 Scur_01778 534 pfam02646
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00475 504 TM pfam02646
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00294 504 TM pfam02646
Syntrophomonas wolfei saponavida / SD2 Sws_02247 520 TM pfam02646
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00018 450 TM pfam02646
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00014 450 TM pfam02646
Syntrophomonas zehnderi OL-4 Szehn Szeh_01991 441 TM pfam02646
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