Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00487

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
amino acid permease
Gene
—
Location
NZ_BBCE01000003.1:54,516–55,934 (−)   472 aa
Keys
gbid 1776504   gene_oid 2731398866   TM×12

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00324

Putative operon (same contig + strand, gap ≤ 300 bp)

Spalm_00487 ◀ Spalm_00488 Spalm_00489 Spalm_00490 Spalm_00491   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #1973  pfam00324

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00487 ◀ 472 TM pfam00324
Syntrophomonas curvata DSM15682 / GL#14 Scur_01295 461 pfam00324
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01820 530 TM pfam00324
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01510 530 TM pfam00324
Syntrophomonas wolfei saponavida / SD2 Sws_01530 478 TM pfam00324
↑ Top




v1.00 @copyright 2026 UCLA