Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_01898

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
heterodisulfide reductase-related iron-sulfur binding cluster
Gene
—
Location
NZ_BBCE01000016.1:58,366–60,501 (+)   711 aa
Keys
gbid 1776588   gene_oid 2731400526   TM×6

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam02665,pfam13183,pfam02754,pfam02754

Putative operon (same contig + strand, gap ≤ 300 bp)

Spalm_01890 Spalm_01891 Spalm_01892 Spalm_01893 Spalm_01894 Spalm_01895 Spalm_01896 Spalm_01897 Spalm_01898 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

11 proteins across 8 genomes share architecture group #440  pfam02665,pfam02754,pfam02754,pfam13183

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01898 ◀ 711 TM pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas curvata DSM15682 / GL#14 Scur_01106 709 pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00346 710 TM pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01133 712 TM pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00424 710 TM pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02203 712 TM pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas wolfei saponavida / SD2 Sws_00307 711 TM pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas wolfei saponavida / SD2 Sws_00865 704 TM pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00732 714 TM pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00692 714 TM pfam02665,pfam13183,pfam02754,pfam02754
Syntrophomonas zehnderi OL-4 Szehn Szeh_02117 709 TM pfam02665,pfam13183,pfam02754,pfam02754
↑ Top




v1.00 @copyright 2026 UCLA