Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_01972

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
oligoendopeptidase F
Gene
pepF
Location
NZ_BBCE01000017.1:64,551–66,347 (+)   598 aa
Keys
gbid 1776702   gene_oid 2731400609  

Domain architecture

Pfam domain
Pfam signature: pfam08439,pfam01432

Putative operon (same contig + strand, gap ≤ 300 bp)

Spalm_01972 ◀ Spalm_01973 Spalm_01974   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1086  pfam01432,pfam08439

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01972 ◀ 598 pfam08439,pfam01432
Syntrophomonas curvata DSM15682 / GL#14 Scur_00686 598 pfam08439,pfam01432
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00348 601 pfam08439,pfam01432
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00422 601 pfam08439,pfam01432
Syntrophomonas wolfei saponavida / SD2 Sws_00614 601 pfam08439,pfam01432
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02229 600 pfam08439,pfam01432
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01952 600 pfam08439,pfam01432
Syntrophomonas zehnderi OL-4 Szehn Szeh_00919 608 pfam08439,pfam01432
↑ Top




v1.00 @copyright 2026 UCLA