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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_01423

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
tRNA 2-thiouridine(34) synthase MnmA
Gene
mnmA
Location
NZ_BBCE01000010.1:94,599–95,615 (+)   338 aa
Keys
gbid 1777222   gene_oid 2731399964  

Domain architecture

Pfam domain
Pfam signature: pfam03054,pfam20259,pfam20258

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 5 genomes share architecture group #1935  pfam03054,pfam20258,pfam20259

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01423 ◀ 338 pfam03054,pfam20259,pfam20258
Syntrophomonas curvata DSM15682 / GL#14 Scur_00922 337 pfam03054,pfam20259,pfam20258
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00442 338 pfam03054,pfam20259,pfam20258
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00326 338 pfam03054,pfam20259,pfam20258
Syntrophomonas wolfei saponavida / SD2 Sws_00505 342 pfam03054,pfam20259,pfam20258
Syntrophomonas wolfei saponavida / SD2 Sws_02627 357 pfam03054,pfam20259,pfam20258
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