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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00841

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
DNA-binding protein WhiA
Gene
whiA
Location
NZ_BBCE01000005.1:109,230–110,159 (+)   309 aa
Keys
gbid 1777381   gene_oid 2731399289  

Domain architecture

Pfam domain
Pfam signature: pfam10298,pfam14527,pfam02650

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #184  pfam02650,pfam10298,pfam14527

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00841 ◀ 309 pfam10298,pfam14527,pfam02650
Syntrophomonas curvata DSM15682 / GL#14 Scur_00320 313 pfam10298,pfam14527,pfam02650
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01936 315 pfam10298,pfam14527,pfam02650
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01326 315 pfam10298,pfam14527,pfam02650
Syntrophomonas wolfei saponavida / SD2 Sws_01342 315 pfam10298,pfam14527,pfam02650
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00237 315 pfam10298,pfam14527,pfam02650
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00260 315 pfam10298,pfam14527,pfam02650
Syntrophomonas zehnderi OL-4 Szehn Szeh_02343 314 pfam10298,pfam14527,pfam02650
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