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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00554

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
3-hydroxyacyl-CoA dehydrogenase
Gene
—
Location
NZ_BBCE01000003.1:135,396–136,163 (−)   255 aa
Keys
gbid 1777577   gene_oid 2731398945  

Domain architecture

Pfam domain
Pfam signature: pfam00106

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

10 proteins across 6 genomes share architecture group #1859  pfam00106

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00554 ◀ 255 pfam00106
Syntrophomonas curvata DSM15682 / GL#14 Scur_00586 255 pfam00106
Syntrophomonas curvata DSM15682 / GL#14 Scur_01818 280 pfam00106
Syntrophomonas curvata DSM15682 / GL#14 Scur_01819 297 pfam00106
Syntrophomonas curvata DSM15682 / GL#14 Scur_01829 289 pfam00106
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00835 255 pfam00106
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02511 255 pfam00106
Syntrophomonas wolfei saponavida / SD2 Sws_01690 302 pfam00106
Syntrophomonas wolfei saponavida / SD2 Sws_03060 255 pfam00106
Syntrophomonas zehnderi OL-4 Szehn Szeh_00840 255 pfam00106
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