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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_02333

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
sigma-54-dependent Fis family transcriptional regulator
Gene
—
Location
NZ_CGIH01000042.1:17,510–19,441 (+)   643 aa
Keys
gbid 1783809   gene_oid 2677390253  

Domain architecture

Pfam domain
Pfam signature: pfam01590,pfam00989,pfam00158,pfam02954

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #1634  pfam00158,pfam00989,pfam01590,pfam02954

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_02333 ◀ 643 pfam01590,pfam00989,pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_01686 673 pfam01590,pfam00989,pfam00158,pfam02954
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01244 667 pfam01590,pfam00989,pfam00158,pfam02954
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02083 667 pfam01590,pfam00989,pfam00158,pfam02954
Syntrophomonas wolfei saponavida / SD2 Sws_01094 655 pfam01590,pfam00989,pfam00158,pfam02954
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01927 671 pfam01590,pfam00989,pfam00158,pfam02954
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