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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_02222

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
23S ribosomal RNA methyltransferase Erm
Gene
erm
Location
NZ_CGIH01000039.1:22,554–23,342 (+)   262 aa
Keys
gbid 1783971   gene_oid 2677390140  

Domain architecture

Pfam domain
Pfam signature: pfam00398

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 8 genomes share architecture group #40  pfam00398

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_00409 291 pfam00398
Syntrophomonas zehnderi OL-4 Szehn Szeh_02222 ◀ 262 pfam00398
Syntrophomonas curvata DSM15682 / GL#14 Scur_00056 276 pfam00398
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02102 287 pfam00398
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01159 287 pfam00398
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01318 289 pfam00398
Syntrophomonas wolfei saponavida / SD2 Sws_01202 284 pfam00398
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00050 294 pfam00398
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00053 294 pfam00398
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