Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Szeh_00856

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
DEAD/DEAH box helicase
Gene
—
Location
NZ_CGIH01000013.1:22,684–24,264 (+)   526 aa
Keys
gbid 1783972   gene_oid 2677388733  

Domain architecture

Pfam domain
Pfam signature: pfam00270,pfam00271,pfam03880

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #1080  pfam00270,pfam00271,pfam03880

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_00856 ◀ 526 pfam00270,pfam00271,pfam03880
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00103 532 pfam00270,pfam00271,pfam03880
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00667 532 pfam00270,pfam00271,pfam03880
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00218 530 pfam00270,pfam00271,pfam03880
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02209 530 pfam00270,pfam00271,pfam03880
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01930 530 pfam00270,pfam00271,pfam03880
↑ Top




v1.00 @copyright 2026 UCLA