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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_01040

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
radical SAM/SPASM domain-containing protein
Gene
—
Location
NZ_CGIH01000018.1:105,780–107,195 (+)   471 aa
Keys
gbid 1785360   gene_oid 2677388918  

Domain architecture

Pfam domain
Pfam signature: pfam13353,pfam04055,pfam13186

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

21 proteins across 8 genomes share architecture group #436  pfam04055,pfam13186,pfam13353

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_01040 ◀ 471 pfam13353,pfam04055,pfam13186
Syntrophomonas zehnderi OL-4 Szehn Szeh_02124 330 pfam13353,pfam04055,pfam13186
Syntrophomonas zehnderi OL-4 Szehn Szeh_02126 390 pfam13353,pfam04055,pfam13186
Syntrophomonas curvata DSM15682 / GL#14 Scur_01098 398 pfam13353,pfam04055,pfam13186
Syntrophomonas curvata DSM15682 / GL#14 Scur_01099 334 pfam13353,pfam04055,pfam13186
Syntrophomonas curvata DSM15682 / GL#14 Scur_02799 470 pfam04055,pfam13353,pfam13186
Syntrophomonas curvata DSM15682 / GL#14 Scur_02849 464 pfam13353,pfam04055,pfam13186
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01142 391 pfam13353,pfam04055,pfam13186
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02003 396 pfam13353,pfam04055,pfam13186
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02216 447 pfam04055,pfam13353,pfam13186
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00991 447 pfam04055,pfam13353,pfam13186
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01259 396 pfam13353,pfam04055,pfam13186
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02194 391 pfam13353,pfam04055,pfam13186
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01889 393 pfam13353,pfam04055,pfam13186
Syntrophomonas wolfei saponavida / SD2 Sws_00314 331 pfam13353,pfam04055,pfam13186
Syntrophomonas wolfei saponavida / SD2 Sws_00316 392 pfam13353,pfam04055,pfam13186
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00723 390 pfam13353,pfam04055,pfam13186
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00725 333 pfam13353,pfam04055,pfam13186
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02888 458 pfam13353,pfam04055,pfam13186
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00683 390 pfam13353,pfam04055,pfam13186
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00685 333 pfam13353,pfam04055,pfam13186
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