Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Szeh_02572

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Gene
cobT
Location
NZ_CGIH01000050.1:13,486–14,541 (−)   351 aa
Keys
gbid 1815037   gene_oid 2677390507  

Domain architecture

Pfam domain
Pfam signature: pfam02277

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

11 proteins across 8 genomes share architecture group #844  pfam02277

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_02570 351 pfam02277
Syntrophomonas zehnderi OL-4 Szehn Szeh_02572 ◀ 351 pfam02277
Syntrophomonas curvata DSM15682 / GL#14 Scur_01893 308 pfam02277
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01412 308 pfam02277
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01915 308 pfam02277
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01992 324 pfam02277
Syntrophomonas wolfei saponavida / SD2 Sws_00304 299 pfam02277
Syntrophomonas wolfei saponavida / SD2 Sws_00822 351 pfam02277
Syntrophomonas wolfei saponavida / SD2 Sws_01357 360 pfam02277
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01575 299 pfam02277
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01426 301 pfam02277
↑ Top




v1.00 @copyright 2026 UCLA