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◀ domain architecture  ·  operons  ·  ❔ guide
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Swg_00015

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
peptidoglycan editing factor PgeF
Gene
pgeF
Location
NC_008346.1:20,287–21,099 (−)   270 aa
Keys
gbid 48544   gene_oid 638136911  

Domain architecture

Pfam domain
Pfam signature: pfam02578

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 8 genomes share architecture group #14  pfam02578

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00015 ◀ 270 pfam02578
Syntrophomonas curvata DSM15682 / GL#14 Scur_01718 245 pfam02578
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00520 271 pfam02578
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00249 271 pfam02578
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01515 121 pfam02578
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01516 166 pfam02578
Syntrophomonas wolfei saponavida / SD2 Sws_02359 271 pfam02578
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00019 270 pfam02578
Syntrophomonas zehnderi OL-4 Szehn Szeh_01418 272 pfam02578
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