◀ domain architecture  ·  operons  ·  ❔ guide

Ser_00303

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
YgaP-like transmembrane domain
Gene
Location
NZ_CM128632.1:326,872–327,039 (−)   55 aa
Keys
gbid 945646   gene_oid 8030286876   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam11127

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 5 genomes share architecture group #1538  pfam11127

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00303 55 TM pfam11127
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00467 55 TM pfam11127
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01798 64 TM pfam11127
Syntrophomonas wolfei saponavida / SD2 Sws_02242 57 TM pfam11127
Syntrophomonas wolfei saponavida / SD2 Sws_02420 58 TM pfam11127
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01203 70 TM pfam11127
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