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◀ domain architecture  ·  operons  ·  ❔ guide
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Ser_01201

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
HU family DNA-binding protein
Gene
—
Location
NZ_CM128632.1:1,352,482–1,352,805 (−)   107 aa
Keys
gbid 946562   gene_oid 8030287841  

Domain architecture

Pfam domain
Pfam signature: pfam00216

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

17 proteins across 8 genomes share architecture group #59  pfam00216

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01201 ◀ 107 pfam00216
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02062 90 pfam00216
Syntrophomonas curvata DSM15682 / GL#14 Scur_00163 90 pfam00216
Syntrophomonas curvata DSM15682 / GL#14 Scur_01053 108 pfam00216
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01199 90 pfam00216
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02130 107 pfam00216
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00442 110 pfam00216
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01283 96 pfam00216
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02378 90 pfam00216
Syntrophomonas wolfei saponavida / SD2 Sws_00351 107 pfam00216
Syntrophomonas wolfei saponavida / SD2 Sws_01228 90 pfam00216
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00083 90 pfam00216
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00682 110 pfam00216
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00084 90 pfam00216
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00642 110 pfam00216
Syntrophomonas zehnderi OL-4 Szehn Szeh_00443 98 pfam00216
Syntrophomonas zehnderi OL-4 Szehn Szeh_01334 109 pfam00216
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