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◀ domain architecture  ·  operons  ·  ❔ guide
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Ser_02019

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
N-acetylmuramoyl-L-alanine amidase
Gene
—
Location
NZ_CM128632.1:2,226,399–2,228,876 (−)   825 aa
Keys
gbid 947379   gene_oid 8030288695   SignalP TM×1

Domain architecture

Pfam domain ▏signal peptide ▮ TM helix
Pfam signature: pfam08239,pfam08239,pfam07833,pfam08239,pfam01520

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 4 genomes share architecture group #1784  pfam01520,pfam07833,pfam08239,pfam08239,pfam08239

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02019 ◀ 825 SPTM pfam08239,pfam08239,pfam07833,pfam08239,pfam01520
Syntrophomonas curvata DSM15682 / GL#14 Scur_00207 807 pfam08239,pfam08239,pfam08239,pfam07833,pfam01520
Syntrophomonas wolfei saponavida / SD2 Sws_01263 782 TM pfam08239,pfam08239,pfam07833,pfam08239,pfam01520
Syntrophomonas zehnderi OL-4 Szehn Szeh_00481 807 TM pfam08239,pfam08239,pfam07833,pfam08239,pfam01520
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