Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Scur_01541

smpp Syntrophomonas curvata DSM15682
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
tRNA 2-thiocytidine biosynthesis TtcA family protein
Gene
—
Location
NZ_CM129641.1:1,778,161–1,778,901 (+)   246 aa
Keys
gbid 1571808   gene_oid 8025905516  

Domain architecture

Pfam domain
Pfam signature: pfam01171

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 8 genomes share architecture group #627  pfam01171

GenomeLocusaaSP/TMPfam order
Syntrophomonas curvata DSM15682 / GL#14 Scur_01541 ◀ 246 pfam01171
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00698 242 pfam01171
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00080 242 pfam01171
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01559 156 pfam01171
Syntrophomonas wolfei saponavida / SD2 Sws_02851 233 pfam01171
Syntrophomonas wolfei saponavida / SD2 Sws_03181 288 pfam01171
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01114 240 pfam01171
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01013 240 pfam01171
Syntrophomonas zehnderi OL-4 Szehn Szeh_01189 244 pfam01171
↑ Top




v1.00 @copyright 2026 UCLA