Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Scur_01924

smpp Syntrophomonas curvata DSM15682
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
diaminopimelate decarboxylase
Gene
lysA
Location
NZ_CM129641.1:2,202,792–2,204,171 (−)   459 aa
Keys
gbid 1572202   gene_oid 8025905944  

Domain architecture

Pfam domain
Pfam signature: pfam00278,pfam02784

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 4 genomes share architecture group #2089  pfam00278,pfam02784

GenomeLocusaaSP/TMPfam order
Syntrophomonas curvata DSM15682 / GL#14 Scur_01924 ◀ 459 pfam00278,pfam02784
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01571 435 pfam00278,pfam02784
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02027 426 pfam00278,pfam02784
Syntrophomonas wolfei saponavida / SD2 Sws_02081 430 pfam00278,pfam02784
Syntrophomonas zehnderi OL-4 Szehn Szeh_00850 404 pfam00278,pfam02784
↑ Top




v1.00 @copyright 2026 UCLA