Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Scur_01955

smpp Syntrophomonas curvata DSM15682
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
sigma-54-dependent transcriptional regulator
Gene
—
Location
NZ_CM129641.1:2,232,460–2,233,896 (+)   478 aa
Keys
gbid 1572233   gene_oid 8025905976  

Domain architecture

Pfam domain
Pfam signature: pfam00072,pfam00158,pfam02954

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 3 genomes share architecture group #2094  pfam00072,pfam00158,pfam02954

GenomeLocusaaSP/TMPfam order
Syntrophomonas curvata DSM15682 / GL#14 Scur_01955 ◀ 478 pfam00072,pfam00158,pfam02954
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00361 481 pfam00072,pfam00158,pfam02954
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01600 464 pfam00072,pfam00158,pfam02954
Syntrophomonas wolfei saponavida / SD2 Sws_02901 478 pfam00072,pfam00158,pfam02954
↑ Top




v1.00 @copyright 2026 UCLA