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◀ domain architecture  ·  operons  ·  ❔ guide
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Sws_00613

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
glycoside hydrolase family 130 protein
Gene
—
Location
NZ_CM161535.1:653,163–656,696 (−)   1177 aa
Keys
gbid 1718296   gene_oid 8099422459  

Domain architecture

GT GH Pfam domain
Pfam signature: pfam04041

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

11 proteins across 8 genomes share architecture group #1085  pfam04041

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00613 ◀ 1177 pfam04041
Syntrophomonas curvata DSM15682 / GL#14 Scur_00688 1171 pfam04041
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00349 1182 pfam04041
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00421 1182 pfam04041
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00453 385 pfam04041
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01974 1122 pfam04041
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02227 1178 pfam04041
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02389 385 pfam04041
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01951 1178 pfam04041
Syntrophomonas zehnderi OL-4 Szehn Szeh_00033 384 pfam04041
Syntrophomonas zehnderi OL-4 Szehn Szeh_00920 1178 pfam04041
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