Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_00952

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
50S ribosomal protein L10
Gene
rplJ
Location
NZ_CM161535.1:1,014,119–1,014,643 (−)   174 aa
Keys
gbid 1718643   gene_oid 8099422819  

Domain architecture

Pfam domain
Pfam signature: pfam00466

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1271  pfam00466

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00952 ◀ 174 pfam00466
Syntrophomonas curvata DSM15682 / GL#14 Scur_02725 174 pfam00466
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02299 174 pfam00466
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00906 174 pfam00466
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02348 173 pfam00466
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02749 174 pfam00466
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02391 173 pfam00466
Syntrophomonas zehnderi OL-4 Szehn Szeh_01083 173 pfam00466
↑ Top




v1.00 @copyright 2026 UCLA