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Sws_01234

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
S1 RNA-binding domain-containing protein
Gene
Location
NZ_CM161535.1:1,309,731–1,310,183 (+)   150 aa
Keys
gbid 1718923   gene_oid 8099423133  

Domain architecture

Pfam domain
Pfam signature: pfam00575

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #64  pfam00575

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_01234 150 pfam00575
Syntrophomonas curvata DSM15682 / GL#14 Scur_00169 147 pfam00575
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02056 148 pfam00575
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01205 148 pfam00575
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01277 145 pfam00575
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00091 152 pfam00575
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00089 152 pfam00575
Syntrophomonas zehnderi OL-4 Szehn Szeh_00449 151 pfam00575
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