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◀ domain architecture  ·  operons  ·  ❔ guide
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Sws_02379

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
endonuclease III
Gene
nth
Location
NZ_CM161535.1:2,560,223–2,560,849 (+)   208 aa
Keys
gbid 1720078   gene_oid 8099424372  

Domain architecture

Pfam domain
Pfam signature: pfam00730

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

12 proteins across 7 genomes share architecture group #505  pfam00730

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00191 228 pfam00730
Syntrophomonas wolfei saponavida / SD2 Sws_02379 ◀ 208 pfam00730
Syntrophomonas curvata DSM15682 / GL#14 Scur_01169 226 pfam00730
Syntrophomonas curvata DSM15682 / GL#14 Scur_01704 209 pfam00730
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02254 224 pfam00730
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01080 228 pfam00730
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00893 223 pfam00730
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01044 207 pfam00730
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00810 222 pfam00730
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00960 207 pfam00730
Syntrophomonas zehnderi OL-4 Szehn Szeh_01433 207 pfam00730
Syntrophomonas zehnderi OL-4 Szehn Szeh_01464 243 pfam00730
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