Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_02553

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
recombinase RecA
Gene
recA
Location
NZ_CM161535.1:2,751,431–2,752,465 (+)   344 aa
Keys
gbid 1720252   gene_oid 8099424558  

Domain architecture

Pfam domain
Pfam signature: pfam00154,pfam21096

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #2053  pfam00154,pfam21096

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_02553 ◀ 344 pfam00154,pfam21096
Syntrophomonas curvata DSM15682 / GL#14 Scur_01632 344 pfam00154,pfam21096
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00581 343 pfam00154,pfam21096
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00188 343 pfam00154,pfam21096
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01137 345 pfam00154,pfam21096
↑ Top




v1.00 @copyright 2026 UCLA