Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_03106

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
LTA synthase family protein
Gene
—
Location
NZ_CM161535.1:3,361,994–3,363,817 (−)   607 aa
Keys
gbid 1720811   gene_oid 8099425144   TM×4

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00884

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

2 proteins across 2 genomes share architecture group #1994  pfam00884

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_03106 ◀ 607 TM pfam00884
Syntrophomonas curvata DSM15682 / GL#14 Scur_01394 378 SP pfam00884
↑ Top




v1.00 @copyright 2026 UCLA