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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_02124

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
50S ribosomal protein L19
Gene
rplS
Location
NZ_BBCE01000020.1:5,737–6,090 (+)   117 aa
Keys
gbid 1775271   gene_oid 2731400784  

Domain architecture

Pfam domain
Pfam signature: pfam01245

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #887  pfam01245

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02124 ◀ 117 pfam01245
Syntrophomonas curvata DSM15682 / GL#14 Scur_01995 116 pfam01245
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01485 116 pfam01245
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01840 116 pfam01245
Syntrophomonas wolfei saponavida / SD2 Sws_02028 116 pfam01245
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01517 116 pfam01245
Syntrophomonas zehnderi OL-4 Szehn Szeh_01892 127 pfam01245
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