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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00017

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
DNA primase
Gene
dnaG
Location
NZ_BBCE01000001.1:11,852–13,642 (−)   596 aa
Keys
gbid 1775464   gene_oid 2731398306  

Domain architecture

Pfam domain
Pfam signature: pfam01807,pfam08275,pfam13155,pfam10410

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #899  pfam01807,pfam08275,pfam10410,pfam13155

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00017 ◀ 596 pfam01807,pfam08275,pfam13155,pfam10410
Syntrophomonas curvata DSM15682 / GL#14 Scur_02012 592 pfam01807,pfam08275,pfam13155,pfam10410
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00327 592 pfam01807,pfam08275,pfam13155,pfam10410
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00443 592 pfam01807,pfam08275,pfam13155,pfam10410
Syntrophomonas wolfei saponavida / SD2 Sws_02014 593 pfam01807,pfam08275,pfam13155,pfam10410
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01533 596 pfam01807,pfam08275,pfam13155,pfam10410
Syntrophomonas zehnderi OL-4 Szehn Szeh_02384 594 pfam01807,pfam08275,pfam13155,pfam10410
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