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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_01720

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
tRNA pseudouridine(38-40) synthase TruA
Gene
truA
Location
NZ_BBCE01000014.1:12,884–13,627 (+)   247 aa
Keys
gbid 1775497   gene_oid 2731400308  

Domain architecture

Pfam domain
Pfam signature: pfam01416,pfam01416

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1236  pfam01416,pfam01416

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01720 ◀ 247 pfam01416,pfam01416
Syntrophomonas curvata DSM15682 / GL#14 Scur_02674 247 pfam01416,pfam01416
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02345 250 pfam01416,pfam01416
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00860 250 pfam01416,pfam01416
Syntrophomonas wolfei saponavida / SD2 Sws_00911 251 pfam01416,pfam01416
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02704 245 pfam01416,pfam01416
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02346 249 pfam01416,pfam01416
Syntrophomonas zehnderi OL-4 Szehn Szeh_01041 247 pfam01416,pfam01416
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