Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00760

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
Uma2 family endonuclease
Gene
—
Location
NZ_BBCE01000005.1:14,752–15,336 (−)   194 aa
Keys
gbid 1775552   gene_oid 2731399186  

Domain architecture

Pfam domain
Pfam signature: pfam05685

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

15 proteins across 5 genomes share architecture group #464  pfam05685

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00760 ◀ 194 pfam05685
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00763 194 pfam05685
Syntrophomonas wolfei saponavida / SD2 Sws_00161 244 pfam05685
Syntrophomonas wolfei saponavida / SD2 Sws_03054 57 pfam05685
Syntrophomonas wolfei saponavida / SD2 Sws_03064 243 pfam05685
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01696 192 pfam05685
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01706 192 pfam05685
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01798 194 pfam05685
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01845 244 pfam05685
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02032 196 pfam05685
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00746 192 pfam05685
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01551 192 pfam05685
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01654 244 pfam05685
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02512 245 pfam05685
Syntrophomonas zehnderi OL-4 Szehn Szeh_01159 252 pfam05685
↑ Top




v1.00 @copyright 2026 UCLA