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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_02268

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
DNA polymerase III subunit beta
Gene
dnaN
Location
NZ_BBCE01000023.1:18,114–19,190 (−)   358 aa
Keys
gbid 1775638   gene_oid 2731400955  

Domain architecture

Pfam domain
Pfam signature: pfam00712,pfam02767,pfam02768

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 8 genomes share architecture group #2  pfam00712,pfam02767,pfam02768

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01642 379 pfam00712,pfam02767,pfam02768
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02268 ◀ 358 pfam00712,pfam02767,pfam02768
Syntrophomonas curvata DSM15682 / GL#14 Scur_00002 379 pfam00712,pfam02767,pfam02768
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02142 379 pfam00712,pfam02767,pfam02768
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01119 379 pfam00712,pfam02767,pfam02768
Syntrophomonas wolfei saponavida / SD2 Sws_01138 379 pfam00712,pfam02767,pfam02768
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00002 380 pfam00712,pfam02767,pfam02768
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00002 380 pfam00712,pfam02767,pfam02768
Syntrophomonas zehnderi OL-4 Szehn Szeh_00828 378 pfam00712,pfam02767,pfam02768
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