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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_01950

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
CCA tRNA nucleotidyltransferase
Gene
—
Location
NZ_BBCE01000017.1:39,942–41,255 (+)   437 aa
Keys
gbid 1776186   gene_oid 2731400584  

Domain architecture

Pfam domain
Pfam signature: pfam01743,pfam12627,pfam01966

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 5 genomes share architecture group #2161  pfam01743,pfam01966,pfam12627

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00954 439 pfam01743,pfam12627,pfam01966
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01950 ◀ 437 pfam01743,pfam12627,pfam01966
Syntrophomonas curvata DSM15682 / GL#14 Scur_02434 432 pfam01743,pfam12627,pfam01966
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00082 431 pfam01743,pfam12627,pfam01966
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00689 431 pfam01743,pfam12627,pfam01966
Syntrophomonas zehnderi OL-4 Szehn Szeh_02590 430 pfam01743,pfam12627,pfam01966
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