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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_01257

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
tRNA dihydrouridine synthase DusB
Gene
dusB
Location
NZ_BBCE01000009.1:43,761–44,729 (−)   322 aa
Keys
gbid 1776275   gene_oid 2731399770  

Domain architecture

Pfam domain
Pfam signature: pfam01207

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #1387  pfam01207

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01257 ◀ 322 pfam01207
Syntrophomonas curvata DSM15682 / GL#14 Scur_00193 319 pfam01207
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02034 321 pfam01207
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01227 321 pfam01207
Syntrophomonas wolfei saponavida / SD2 Sws_01252 323 pfam01207
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00110 318 pfam01207
Syntrophomonas zehnderi OL-4 Szehn Szeh_00465 336 pfam01207
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