Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_01884

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
twin-arginine translocase subunit TatC
Gene
tatC
Location
NZ_BBCE01000016.1:43,911–44,672 (+)   253 aa
Keys
gbid 1776279   gene_oid 2731400511   TM×6

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00902

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #432  pfam00902

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01884 ◀ 253 TM pfam00902
Syntrophomonas curvata DSM15682 / GL#14 Scur_01092 253 pfam00902
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01148 257 TM pfam00902
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02188 257 TM pfam00902
Syntrophomonas wolfei saponavida / SD2 Sws_00322 260 TM pfam00902
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00717 283 TM pfam00902
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00677 283 TM pfam00902
Syntrophomonas zehnderi OL-4 Szehn Szeh_02132 277 TM pfam00902
↑ Top




v1.00 @copyright 2026 UCLA