Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00783

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
ComF family protein
Gene
—
Location
NZ_BBCE01000005.1:47,168–47,887 (+)   239 aa
Keys
gbid 1776350   gene_oid 2731399213  

Domain architecture

Pfam domain
Pfam signature: pfam18912,pfam00156

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

3 proteins across 3 genomes share architecture group #2531  pfam00156,pfam18912

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00783 ◀ 239 pfam18912,pfam00156
Syntrophomonas wolfei saponavida / SD2 Sws_01304 240 pfam18912,pfam00156
Syntrophomonas zehnderi OL-4 Szehn Szeh_00513 260 pfam18912,pfam00156
↑ Top




v1.00 @copyright 2026 UCLA