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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_01263

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
3-methyl-2-oxobutanoate hydroxymethyltransferase
Gene
panB
Location
NZ_BBCE01000009.1:50,621–51,451 (−)   276 aa
Keys
gbid 1776426   gene_oid 2731399778  

Domain architecture

Pfam domain
Pfam signature: pfam02548

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #75  pfam02548

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01263 ◀ 276 pfam02548
Syntrophomonas curvata DSM15682 / GL#14 Scur_00182 276 pfam02548
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02045 276 pfam02548
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01216 276 pfam02548
Syntrophomonas wolfei saponavida / SD2 Sws_01245 276 pfam02548
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00102 276 pfam02548
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00100 276 pfam02548
Syntrophomonas zehnderi OL-4 Szehn Szeh_00459 276 pfam02548
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