◀ domain architecture  ·  operons  ·  ❔ guide

Spalm_00923

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
YkgJ family cysteine cluster protein
Gene
Location
NZ_BBCE01000006.1:66,108–66,755 (+)   215 aa
Keys
gbid 1776733   gene_oid 2731399382  

Domain architecture

Pfam domain
Pfam signature: pfam03692

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 8 genomes share architecture group #1168  pfam03692

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00923 215 pfam03692
Syntrophomonas curvata DSM15682 / GL#14 Scur_02495 215 pfam03692
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00022 220 pfam03692
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00745 220 pfam03692
Syntrophomonas wolfei saponavida / SD2 Sws_00068 220 pfam03692
Syntrophomonas wolfei saponavida / SD2 Sws_01575 215 pfam03692
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02533 217 pfam03692
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02149 217 pfam03692
Syntrophomonas zehnderi OL-4 Szehn Szeh_01944 214 pfam03692
↑ Top





v1.00 @copyright 2026 UCLA