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Spalm_01835

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
DUF421 domain-containing protein
Gene
Location
NZ_BBCE01000015.1:66,973–67,632 (−)   219 aa
Keys
gbid 1776750   gene_oid 2731400456   TM×3

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam04239

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

15 proteins across 8 genomes share architecture group #681  pfam04239

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00484 226 TM pfam04239
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01835 219 TM pfam04239
Syntrophomonas curvata DSM15682 / GL#14 Scur_00448 229 pfam04239
Syntrophomonas curvata DSM15682 / GL#14 Scur_01470 239 pfam04239
Syntrophomonas curvata DSM15682 / GL#14 Scur_01748 221 pfam04239
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00497 219 TM pfam04239
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01828 226 TM pfam04239
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00272 219 TM pfam04239
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01502 226 TM pfam04239
Syntrophomonas wolfei saponavida / SD2 Sws_02277 223 TM pfam04239
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00369 225 TM pfam04239
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01250 227 TM pfam04239
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01109 227 TM pfam04239
Syntrophomonas zehnderi OL-4 Szehn Szeh_01383 223 TM pfam04239
Syntrophomonas zehnderi OL-4 Szehn Szeh_02540 237 TM pfam04239
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