Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_01680

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
DUF342 domain-containing protein
Gene
—
Location
NZ_BBCE01000013.1:66,989–68,365 (+)   458 aa
Keys
gbid 1776751   gene_oid 2731400263  

Domain architecture

Pfam domain
Pfam signature: pfam20250,pfam03961

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 6 genomes share architecture group #1501  pfam03961,pfam20250

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00020 536 pfam20250,pfam03961
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01680 ◀ 458 pfam20250,pfam03961
Syntrophomonas curvata DSM15682 / GL#14 Scur_01240 468 pfam20250,pfam03961
Syntrophomonas curvata DSM15682 / GL#14 Scur_02015 532 pfam20250,pfam03961
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01014 468 pfam20250,pfam03961
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02325 468 pfam20250,pfam03961
Syntrophomonas wolfei saponavida / SD2 Sws_00113 468 pfam20250,pfam03961
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00959 467 pfam20250,pfam03961
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01675 526 pfam20250,pfam03961
↑ Top




v1.00 @copyright 2026 UCLA