Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00653

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
YihY/virulence factor BrkB family protein
Gene
—
Location
NZ_BBCE01000004.1:67,139–67,981 (−)   280 aa
Keys
gbid 1776752   gene_oid 2731399062   TM×6

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam03631

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 4 genomes share architecture group #2206  pfam03631

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00653 ◀ 280 TM pfam03631
Syntrophomonas curvata DSM15682 / GL#14 Scur_02812 288 pfam03631
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02206 276 TM pfam03631
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01005 276 TM pfam03631
↑ Top




v1.00 @copyright 2026 UCLA