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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00822

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
ribosome hibernation-promoting factor, HPF/YfiA family
Gene
hpf
Location
NZ_BBCE01000005.1:81,457–82,002 (+)   181 aa
Keys
gbid 1777016   gene_oid 2731399257  

Domain architecture

Pfam domain
Pfam signature: pfam02482,pfam16321

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #166  pfam02482,pfam16321

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00822 ◀ 181 pfam02482,pfam16321
Syntrophomonas curvata DSM15682 / GL#14 Scur_00287 181 pfam02482,pfam16321
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01962 181 pfam02482,pfam16321
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01300 180 pfam02482,pfam16321
Syntrophomonas wolfei saponavida / SD2 Sws_01319 178 pfam02482,pfam16321
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00213 181 pfam02482,pfam16321
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00235 181 pfam02482,pfam16321
Syntrophomonas zehnderi OL-4 Szehn Szeh_02369 182 pfam02482,pfam16321
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