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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00092

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
rod shape-determining protein MreD
Gene
mreD
Location
NZ_BBCE01000001.1:87,467–87,970 (−)   167 aa
Keys
gbid 1777106   gene_oid 2731398392   TM×5

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam04093

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #968  pfam04093

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00092 ◀ 167 TM pfam04093
Syntrophomonas curvata DSM15682 / GL#14 Scur_02229 168 pfam04093
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00249 167 TM pfam04093
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00522 167 TM pfam04093
Syntrophomonas wolfei saponavida / SD2 Sws_01939 167 TM pfam04093
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01860 167 TM pfam04093
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01669 167 TM pfam04093
Syntrophomonas zehnderi OL-4 Szehn Szeh_01847 167 TM pfam04093
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