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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_01307

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
CopG family transcriptional regulator
Gene
—
Location
NZ_BBCE01000009.1:96,882–97,043 (−)   53 aa
Keys
gbid 1777247   gene_oid 2731399832  

Domain architecture

Pfam domain
Pfam signature: pfam01402

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

17 proteins across 7 genomes share architecture group #1384  pfam01402

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00196 80 pfam01402
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01307 ◀ 53 pfam01402
Syntrophomonas curvata DSM15682 / GL#14 Scur_00136 47 pfam01402
Syntrophomonas curvata DSM15682 / GL#14 Scur_02388 89 pfam01402
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00136 89 pfam01402
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01186 65 pfam01402
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02091 53 pfam01402
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00635 89 pfam01402
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01170 53 pfam01402
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02145 65 pfam01402
Syntrophomonas wolfei saponavida / SD2 Sws_01210 55 pfam01402
Syntrophomonas wolfei saponavida / SD2 Sws_01726 88 pfam01402
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00062 53 pfam01402
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02193 89 pfam01402
Syntrophomonas zehnderi OL-4 Szehn Szeh_00416 52 pfam01402
Syntrophomonas zehnderi OL-4 Szehn Szeh_00588 144 pfam01402
Syntrophomonas zehnderi OL-4 Szehn Szeh_02066 77 pfam01402
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