Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_01186

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
magnesium/cobalt transporter CorA
Gene
corA
Location
NZ_BBCE01000008.1:101,263–102,240 (+)   325 aa
Keys
gbid 1777292   gene_oid 2731399697   TM×2

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01544

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 6 genomes share architecture group #1614  pfam01544

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01186 ◀ 325 TM pfam01544
Syntrophomonas curvata DSM15682 / GL#14 Scur_01280 325 pfam01544
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00974 325 TM pfam01544
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02365 325 TM pfam01544
Syntrophomonas wolfei saponavida / SD2 Sws_00074 326 TM pfam01544
Syntrophomonas wolfei saponavida / SD2 Sws_02390 336 TM pfam01544
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01759 326 TM pfam01544
↑ Top




v1.00 @copyright 2026 UCLA