Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00701

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
F0F1 ATP synthase subunit A
Gene
atpB
Location
NZ_BBCE01000004.1:110,584–111,267 (+)   227 aa
Keys
gbid 1777395   gene_oid 2731399116   TM×6

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00119

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1298  pfam00119

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00701 ◀ 227 TM pfam00119
Syntrophomonas curvata DSM15682 / GL#14 Scur_02766 227 pfam00119
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02256 227 TM pfam00119
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00951 227 TM pfam00119
Syntrophomonas wolfei saponavida / SD2 Sws_01000 227 TM pfam00119
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02795 227 TM pfam00119
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02434 227 TM pfam00119
Syntrophomonas zehnderi OL-4 Szehn Szeh_00236 227 TM pfam00119
↑ Top




v1.00 @copyright 2026 UCLA