Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_01334

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
sigma factor G inhibitor Gin
Gene
—
Location
NZ_BBCE01000009.1:118,561–118,791 (−)   76 aa
Keys
gbid 1777478   gene_oid 2731399860  

Domain architecture

Pfam domain
Pfam signature: pfam10764

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #1381  pfam10764

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01334 ◀ 76 pfam10764
Syntrophomonas curvata DSM15682 / GL#14 Scur_00041 73 pfam10764
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02117 71 pfam10764
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01144 71 pfam10764
Syntrophomonas wolfei saponavida / SD2 Sws_01188 73 pfam10764
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00036 73 pfam10764
Syntrophomonas zehnderi OL-4 Szehn Szeh_02405 75 pfam10764
↑ Top




v1.00 @copyright 2026 UCLA