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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00547

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
trp RNA-binding attenuation protein MtrB
Gene
mtrB
Location
NZ_BBCE01000003.1:127,199–127,450 (+)   83 aa
Keys
gbid 1777539   gene_oid 2731398935  

Domain architecture

Pfam domain
Pfam signature: pfam02081

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1138  pfam02081

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00547 ◀ 83 pfam02081
Syntrophomonas curvata DSM15682 / GL#14 Scur_00553 84 pfam02081
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01755 80 pfam02081
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01578 80 pfam02081
Syntrophomonas wolfei saponavida / SD2 Sws_00732 85 pfam02081
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02460 83 pfam02081
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02078 83 pfam02081
Syntrophomonas zehnderi OL-4 Szehn Szeh_02727 80 pfam02081
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