Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00185

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
Gene
tsaD
Location
NZ_BBCE01000001.1:182,280–183,290 (−)   336 aa
Keys
gbid 1777745   gene_oid 2731398518  

Domain architecture

Pfam domain
Pfam signature: pfam00814

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

24 proteins across 8 genomes share architecture group #364  pfam00814

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00185 ◀ 336 pfam00814
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00187 239 pfam00814
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00339 320 pfam00814
Syntrophomonas curvata DSM15682 / GL#14 Scur_00994 322 pfam00814
Syntrophomonas curvata DSM15682 / GL#14 Scur_02378 336 pfam00814
Syntrophomonas curvata DSM15682 / GL#14 Scur_02380 238 pfam00814
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00144 238 pfam00814
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00146 336 pfam00814
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01282 326 pfam00814
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00625 336 pfam00814
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00627 238 pfam00814
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02045 326 pfam00814
Syntrophomonas wolfei saponavida / SD2 Sws_00398 328 pfam00814
Syntrophomonas wolfei saponavida / SD2 Sws_01647 240 pfam00814
Syntrophomonas wolfei saponavida / SD2 Sws_01649 337 pfam00814
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00583 323 pfam00814
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02167 336 pfam00814
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02169 238 pfam00814
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00557 326 pfam00814
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01897 346 pfam00814
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01899 238 pfam00814
Syntrophomonas zehnderi OL-4 Szehn Szeh_01280 322 pfam00814
Syntrophomonas zehnderi OL-4 Szehn Szeh_02073 222 pfam00814
Syntrophomonas zehnderi OL-4 Szehn Szeh_02075 336 pfam00814
↑ Top




v1.00 @copyright 2026 UCLA