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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_00407

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
3D domain-containing protein
Gene
—
Location
NZ_CGIH01000005.1:3,311–4,279 (+)   322 aa
Keys
gbid 1783352   gene_oid 2677388270   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam03990,pfam03990,pfam07501,pfam06725

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #38  pfam03990,pfam03990,pfam06725,pfam07501

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_00407 ◀ 322 TM pfam03990,pfam03990,pfam07501,pfam06725
Syntrophomonas curvata DSM15682 / GL#14 Scur_00054 322 pfam03990,pfam03990,pfam07501,pfam06725
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02105 322 TM pfam03990,pfam03990,pfam07501,pfam06725
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01156 322 TM pfam03990,pfam03990,pfam07501,pfam06725
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01320 322 TM pfam03990,pfam03990,pfam07501,pfam06725
Syntrophomonas wolfei saponavida / SD2 Sws_01200 319 TM pfam03990,pfam03990,pfam07501,pfam06725
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00048 320 TM pfam03990,pfam03990,pfam07501,pfam06725
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00051 320 TM pfam03990,pfam03990,pfam07501,pfam06725
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